Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYN----------NAVGAGTGIVIDPNGVVLTNNHVIAGATDINAFSV-GSGQTYGVDVVGYDRTQDVAVLQLRGA---GGLPSAAIGGGVAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAASDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVVDNN------------GNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSAT----------AMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 4FLN Chain:A ((43-356)) | -------------------------------------------------------DASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGD-GKLLTNAHCVEHDTQVKV-KRRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGD-TISVTKGVVSRIEVTSYAHG------SSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVY-------ENIGYVIPTTVVSHFLTDYERNGKYT-----GYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK-KVQVVLRP---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128212 for 2212 contacts (-58.0/contact) +
2D Compatibility (PS) -29883 + (NN) -15273 + (LL) 4108
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -185210.0 ( -83.73 by residue)
QMean score : 0.421
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