Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGVPAKKKQQQGERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEA-HGPVEQRSERQLT-ELVSLQ---SQHPDFLRLFYLLSM--ERS-QDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAELTAFAVALSDGVYFAGHLEP----DTTDVERMYRRLRQALEALIPVLLEET
2GFN Chain:A ((4-199))--------IVDHDERRRALADAVLALIAREGISAVTTRAVAEESGWSTGVLNHYFGSRHELLLAALRRAGDIQGDRYRTILDEEGAGP----IEKLRNITASILPLDERRLAMTRVFLFFYAEG---TARGEIAAFLARWRGVVRESVVAAQREGTVSTDLD--AD----AVTVALVALTDGLALQAILDPVVMKAI-SAEDAAARCVDAAVRR--------


General information:
TITO was launched using:
RESULT:

Template: 2GFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63942 for 1327 contacts (-48.2/contact) +
2D Compatibility (PS) -19383 + (NN) -7922 + (LL) 2412
1D Compatibility (HY) -3200 + (ID) 1850
Total energy: -93885.0 ( -70.75 by residue)
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_2GFN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GFN-query.scw
PDB file : Tito_Scwrl_2GFN.pdb: