Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
1XEO Chain:A ((1-165))
-SVLQVLHIPDERLRKVAKPVEEV-----NAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENR----DERLVLINPELLEKS-----G-ETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK----------------
General information:
TITO was launched using:
RESULT:
Template:
1XEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74018 for 1280 contacts (-57.8/contact) +
2D Compatibility (PS) -17602 + (NN) -3654 + (LL) 684
1D Compatibility (HY) -12000 + (ID) 2650
Total energy: -109240.0 ( -85.34 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1XEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEO-query.scw
PDB file :
Tito_Scwrl_1XEO.pdb
: