Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSD-MEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESLERWH-DVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLS-EASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 4HP8 Chain:A ((3-176)) | ---------------------------------NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTD------AGFDILVNNAG-IIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS--LLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGIN------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77069 for 1347 contacts (-57.2/contact) +
2D Compatibility (PS) -17754 + (NN) -1446 + (LL) 9772
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -99897.0 ( -74.16 by residue)
QMean score : 0.479
|
|
|