Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLSDWELAAARAAIARGLDEDLRYG-----PDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM |
| 1QAP Chain:A ((15-295)) | ---LERINLDIPAAVAQALREDLG-GEVDAGNDITAQL-LPADTQAHATVITREDGVFCGKRWVEEVFI-QLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRV---NGQARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130875 for 2190 contacts (-59.8/contact) +
2D Compatibility (PS) -30260 + (NN) -14317 + (LL) 456
1D Compatibility (HY) -18800 + (ID) 5850
Total energy: -199646.0 ( -91.16 by residue)
QMean score : 0.671
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