Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTSHGFSRAAVVGAGLMGRRIAGVLASAGLDVAITDTNAEILHAAAVEAARVA--------------GAGRGSVAAAADLAAAIPDADLVIEAVVENLAVKQELFERLATLA-PDAVLATNTSVLPIGAVTERVEDGSRVIGTHFWNPPDLIPVVEVVPSARTAPDTADRVVALLTQVGKLPVRVGRDVPGFIGNRLQHALWREAIALVAEGVCDPKTVDLVVRNTIGLRLATLGPLENADYIGLDLTLAIHDAVIPS-LNHDPHPSPLLRELVAAGQLGARTGHGFLDWPAGAREATTARLAQHIAAQLQANEKGRGT |
4R1N Chain:A ((1-281)) | ------MKKVFVLGAGTMGAGIVQAFAAKGCEVIVRDIKEEFVDRGIATITKSLSKLVAKEKITEADKEEILSRISGTTDM-KLAADCDLVVEAAIENMKIKKEIFAELDGICKPETILASNTSSLSITEVASATKRADKVIGMHFFNPAPVMKLVEVIRGAATSQETFDAVKEMSESIGKTPVEV-AEAPGFVVNRILIPMINEATFILQEGVAKEEDIDAAMKLGANHPM---GPLALGDLIGLDVCLAIMDVLYNETGDTKYRASSLLRKYVRAGWLGRKTGKGFYDYS---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143402 for 2242 contacts (-64.0/contact) +
2D Compatibility (PS) -28919 + (NN) -16395 + (LL) 2868
1D Compatibility (HY) -20800 + (ID) 4550
Total energy: -211198.0 ( -94.20 by residue)
QMean score : 0.500
|
|
|