Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGH-GSVLMPCGRCRQVLLEHGGSELLIDHP--VR---PRRLGDLLPDAFGLDDLPRERR
2FR5 Chain:A ((11-145))
-EPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSDLQEEFISPCGACRQVMREFGT-DWAVYMTKPDGTFVVRTVQELLPASFGPEDLQKI--
General information:
TITO was launched using:
RESULT:
Template:
2FR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78991 for 993 contacts (-79.5/contact) +
2D Compatibility (PS) -14172 + (NN) -6814 + (LL) 380
1D Compatibility (HY) -7200 + (ID) 2400
Total energy: -109197.0 ( -109.97 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_2FR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FR5-query.scw
PDB file :
Tito_Scwrl_2FR5.pdb
: