Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLN---APVSVSATTTDGLGLTGRGEGLAAIATALVVSLR
1JY8 Chain:A ((1-155))
----MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI---
General information:
TITO was launched using:
RESULT:
Template:
1JY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142247 for 1302 contacts (-109.3/contact) +
2D Compatibility (PS) -16911 + (NN) -12265 + (LL) 672
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -184351.0 ( -141.59 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1JY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JY8-query.scw
PDB file :
Tito_Scwrl_1JY8.pdb
: