Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGA---QAALDAARAVLDAAPGVAVDYLELRDIGLGPMPLN---GSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
| 3INN Chain:A ((21-303)) | ---------SMQIIHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRARVEN-DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTVSDMYPRPMQTVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVETVREDDGLACSSRNVYLTPEQRRAAIIVPQALDEADRLYRSGMDDPDALEAAIRTFIGRQPLAVPEVIAIRDPETLERLPALQGRPILVALFVRVGATRLLDNRVIGH---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3INN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168478 for 2273 contacts (-74.1/contact) +
2D Compatibility (PS) -31113 + (NN) -23305 + (LL) 844
1D Compatibility (HY) -21600 + (ID) 6000
Total energy: -249652.0 ( -109.83 by residue)
QMean score : 0.776
|
|
|