Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRVLYPGTFDPITKGHGDLIERASRLFDHVIIAV----AASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGF---STLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDISKFVHPAVADALAERFKR
1B6T Chain:A ((3-159))
-KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPS----KKPMFTLEERVALAQQATAHLGNV-EVVGFSD--LMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA-
General information:
TITO was launched using:
RESULT:
Template:
1B6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112617 for 1145 contacts (-98.4/contact) +
2D Compatibility (PS) -16518 + (NN) -9256 + (LL) 476
1D Compatibility (HY) -17600 + (ID) 4200
Total energy: -159715.0 ( -139.49 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_1B6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B6T-query.scw
PDB file :
Tito_Scwrl_1B6T.pdb
: