Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVQYPTIADCVGNTPLVRLQRLPGETSNTLLVKLEGNNPAGSVKDRPALSMITRAELRGDIRPGDTLIEATSGNTGIALAMAAAIKGYKMILIMPDNSTAERKAAMTAYGAELILVSKEEGMEGARDLADKLQREGRGK-VLDQFANGDNPEAHYHSTGPEIWQQTGG-SITHFVSSMGTTGTIMGVSRYLKEQNPAVQIVGLQPMEGSAIPG-------IRRWPQEYLPKIYDASRVDRVVDMHQDEAEDIMRRLAREEGIFCGVSSGGAVAAMLRLSREL-ENAVLVAIICDRGDRYLSSGVYDPR |
3X44 Chain:A ((2-305)) | --PLFNSILDTIGRTPIVRLQRMAPE-HTSVYVKVESFNPGGSVADRLALSVVLDAEAKGLLKPGDTIVECTSGNVGIALAMVAAARGYRFVAVMGDTYSVERRKLIRAYGGKLVLFPGHLGSKGGNLIADELAEK-YGWFRARQFDNPANPSYHRETTASEILADFAGKRLDHFVTGFGTTGTLTGVGQMLRVARPEVRVVALEPSNAAMLARGEWSPHQIQGLAPNFVPGVLDRSVIDDLVTMDEVTARDTSRRLAAEEGIFAGISAGATVATALSIAEHAPEGTVLLAMLPDTGERYLSTFLFDGV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108439 for 2722 contacts (-39.8/contact) +
2D Compatibility (PS) -33232 + (NN) -21949 + (LL) 140
1D Compatibility (HY) -23600 + (ID) 6100
Total energy: -193180.0 ( -70.97 by residue)
QMean score : 0.494
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