Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRI-RPRFYEPDVQR-----MAAPLGELFAAVGVRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGIDAAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGASMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDDGQRIEAKTVVWTVGVRAS-TLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 1XHC Chain:A ((9-301)) | --SKVVIVGNGPGGFELAKQLSQ--------TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITE-----KGEVPYDTLVLATGARAREP-QIKGKEYLLTLRTIFDADRIKESIE---------NSGEAIIIGGGFIGLELAGNLAEAG---------YHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVL-TNSGFIEGKVKICAIGIVPNVDLARRSGIHTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSG-----IIAGTAKAAMEQARVLADILKG----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221352 for 2348 contacts (-94.3/contact) +
2D Compatibility (PS) -29913 + (NN) -4770 + (LL) 7712
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -264923.0 ( -112.83 by residue)
QMean score : 0.385
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