Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQIVILPHADHCPEGAVFEAKPGETILDAALRNGI-EIEHACEKSCACTTCHVIVREGL-DSMEPSDELEDDMLDKA--WGLEPDSRLSCQAVVADE--DLVVEIPKYTINQVSEGH
1XLQ Chain:A ((1-104))
-SKVVYVSHDGT---RRELDVADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLE-SVTAELKPNSRLCCQIIMTPELDGIVVDVPDR---------
General information:
TITO was launched using:
RESULT:
Template:
1XLQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63065 for 721 contacts (-87.5/contact) +
2D Compatibility (PS) -10839 + (NN) -4455 + (LL) 728
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -88931.0 ( -123.34 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1XLQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XLQ-query.scw
PDB file :
Tito_Scwrl_1XLQ.pdb
: