Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLG---------QAPVRVLSLPTHADRV-DDAEVLSVLRQLQAAEREG-PVLMHCKHGNNRTGLFAAMYRIVV-QGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
1FPZ Chain:A ((25-200))
-TPIHISWLSLSRVNCSQFLGLCALPGCKFKDVRRN--------------------------VQKDTEELKSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLR---------------------------GSGAIQTIKQYNYLHEFRDKLAAHL
General information:
TITO was launched using:
RESULT:
Template:
1FPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89288 for 1260 contacts (-70.9/contact) +
2D Compatibility (PS) -18280 + (NN) -10004 + (LL) 3328
1D Compatibility (HY) -6800 + (ID) 1050
Total energy: -122094.0 ( -96.90 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1FPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FPZ-query.scw
PDB file :
Tito_Scwrl_1FPZ.pdb
: