Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDN-LP--LDDERVELLEGDAADAATLAAALK--GCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQG-VKRVVFASSAAVYGQNGEG---------------TAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERAL---K--GTPITVFGDGEQTRDFIYVADLVDFLVQALEAT-AVEPGAVNVGLN--RSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
| 1ORR Chain:A ((2-334)) | ---AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYD-QGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143003 for 2676 contacts (-53.4/contact) +
2D Compatibility (PS) -33068 + (NN) -11945 + (LL) 636
1D Compatibility (HY) -21600 + (ID) 4150
Total energy: -213130.0 ( -79.64 by residue)
QMean score : 0.536
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