Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTVKTVRELRAAVARARSEGKRIGFVPTMGNLHAGHAALVKKAGERADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALE-QAGLRPDYLEIREPISLRPGVPGD-RQLVILAAAYLGSTRLIDNLSVHLD
3INN Chain:A ((22-303))
MQIIHTIEELRQALAPARQQGKKIGFVPTMGYLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTVSDMYPRPMQ--TVVDVPPLGNQIEGEARPGHFAGVATVVSKLFNIVGPDAAYFGEKDFQQLVIIRRMVDDMAIPVRIVGVETVREDDGLACSSRNVYLTPEQRRAAIIVPQALDEADRLYRSGMDDPDALEAAIRTFIGRQPLAVPEVIAIRDPETLERLPALQGRPILVALFVRVGATRLLDNRVIGH-
General information:
TITO was launched using:
RESULT:
Template:
3INN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169248 for 2314 contacts (-73.1/contact) +
2D Compatibility (PS) -31649 + (NN) -23802 + (LL) -128
1D Compatibility (HY) -25200 + (ID) 6750
Total energy: -256777.0 ( -110.97 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3INN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3INN-query.scw
PDB file :
Tito_Scwrl_3INN.pdb
: