Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVSEFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNVNGINNDDVIVTHDAVRPFLTQRIIKENIEVAAKYGA-VDTVIEAIDTIVMSKDKQN-IHSIPVRNEMYQGQTPQSFNIKLLQDSYRALSSEQKEILSDACKIIVESGHAVKLVRGELYNIKVTTPYDLKVANAIIQGDIADD |
| 1INI Chain:A ((4-228)) | THLDVCAVVPAAGFGRRMQT-ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLAN----HPQITVVDGGDERADSVLAGL------KAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI-TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLT------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1INI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102884 for 1799 contacts (-57.2/contact) +
2D Compatibility (PS) -23648 + (NN) -8619 + (LL) 968
1D Compatibility (HY) -8400 + (ID) 3000
Total energy: -145583.0 ( -80.92 by residue)
QMean score : 0.480
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