Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDARDIIKRPVVTEESTSIL-DDKKYTFEVDTRATKTQVKYAVEEIFDVKVAKVNVMNYKGKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFFEV
2WWB Chain:K ((57-137))
LDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGT-------------KKAYVRLTADYDALDIAN-
General information:
TITO was launched using:
RESULT:
Template:
2WWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27487 for 558 contacts (-49.3/contact) +
2D Compatibility (PS) -8505 + (NN) 131 + (LL) 784
1D Compatibility (HY) -5600 + (ID) 1250
Total energy: -41927.0 ( -75.14 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2WWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WWB-query.scw
PDB file :
Tito_Scwrl_2WWB.pdb
: