Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLSSEEIIKMLPHRYPFLMVDRVQSYK--KGIIECRKNITINEPYFQGHFPQRPIVPGVLMIEMAAQSAALLYILDALDGSLPSLDELTAEKIAEKVGYLASVKNFKFKKIVTPGDQLNITCKSQSKLGHLLEIQVVIRDENKKEVASGRMLVSENGN
1U1Z Chain:A ((21-164))
--MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDV--K-------P-----TLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHA-TVDDKPVCSAEIICAERK-
General information:
TITO was launched using:
RESULT:
Template:
1U1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97916 for 1045 contacts (-93.7/contact) +
2D Compatibility (PS) -14897 + (NN) -5696 + (LL) 872
1D Compatibility (HY) -11200 + (ID) 2600
Total energy: -131437.0 ( -125.78 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1U1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U1Z-query.scw
PDB file :
Tito_Scwrl_1U1Z.pdb
: