Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDIKIMALGGVRENGKNLYVVEVNDSIFVLDAGLKYPENEQLGVDVVIPNLDYLIE-----NKKRVQGIFLTHGHADAIGALPYIIAEVKAPVFGSPLTIELAKLFVKNSTAVKKFNNFHVIDSETEIEFQDAVISFFKTTHSIPESMGIVIGTKEG-NIVYTGDFKFDQAARKYYQTDLARLAEIGRDGVLALLSDSANATSNDQVASEYEVGDEIKSVIEDAEG---RVIVAAVASNLIRIQQVFDAAAENGRRVVLTGFDIENIVRTAIRMKRIHIADENMIIKPKDMTRYEDNELLILETGRMGEPINGLQKMAIGRHRYVQIKDGDLVFIVTTPSIAKEAVVARVENLIYKAGGSVKLITQNLRVSGHANGRELQLLMNLLKPKYLFPIQ--GEYRDLSAHAGLAQEVGMSADDIYIVKRGDIMVLEKDGFFHSGFVPAGDVMIDGNAIGDVGNIVLRDRKVLSEDGIFIVVITVSKKEKKIISKARVNTRGFVYVKKSRDILRESAELVNTTVEDYLSKDTFDWGELKGKVRDEVSKFLFDQTKRRPAILPVVMEVR |
| 5AHR Chain:A ((1-343)) | ---------------------------------------SMTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLS---KHFTFPVYCS----EITGNLLKNKLHVQEQY-IHPLPLDTECIVNGVKVVLLDANHC-PGAVMILFYLPNGTVILHTGDFRADPSMER---------SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMS-------QEKYKTLQCLNIPEINSLITTD-----------MCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTVIPQTKGNISIYGIPY---------------SEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTMEKYFREWKLEAGY------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161042 for 2533 contacts (-63.6/contact) +
2D Compatibility (PS) -34216 + (NN) -11172 + (LL) 17004
1D Compatibility (HY) -14400 + (ID) 2900
Total energy: -206726.0 ( -81.61 by residue)
QMean score : 0.378
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