Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHRIALNFEDGVTRFIHAAPGETVADAAYRQGINIPLDCRDGACGTCKCLAEAGRYALGQDYIDDALSAEEAARGYVLTCQMRAESDCVLRVPASSTLCRTGQARYEARISEVRQLSPS--------------TIGLSLRGEALASLAFLPGQYVNLQVPGS-------------EQRRAYSFSSLAK-----DGEVSFLIRNVP--------GGLMSGFLSGTARAGDSLAMDGPLGS-FYLRE--IHRPLLMLAGGTGLAPFTAMLERIAEQG---SAHPLHLVYGVTHDVDLVGLERLEAFAERIPGFTWSACVASADSDY--PRKGYVTEHIAAQ---H--LHEGDVDIYLCG-PPPMVEAVERYLREQGVRPANFYYEKFAASAA |
| 2RC5 Chain:A ((20-302)) | --------------------------------------------------------------------------------------------------------NPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHS-AYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYNGNIQFKGVCSNYMC-DLKPGDEVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKLIKFTGNITLVYGAPYSDELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGPKGMEKGVIEEIQKI--SGNTGTYEEFKHH-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193210 for 1877 contacts (-102.9/contact) +
2D Compatibility (PS) -24991 + (NN) -11621 + (LL) 6952
1D Compatibility (HY) -15200 + (ID) 2800
Total energy: -240870.0 ( -128.33 by residue)
QMean score : 0.463
|
|
|