Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLVACECLPSPGLEPEPCSRARSQAHVYLEQIRNRVALGVPDMTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKERREAVKLKITKYLRRAEEIFNCHLQRPLSSGASPSAGFSSLRLRPIRTLSSAVEQLRGCRVVGVIE-----KVQLVQDPATGGTFVVKSLPRCHMVS-----RERLT---IIPHGVPYMTKLLRYFVSEDSIFLHLEHVQGGTLWSHLLSQAHSRHSGLSSGSTQERMKAQLNPHLNLLTPARLPSGHAPGQDRIALEPPRTSPNLLLAGEAPSTRPQREAEGEPTARTSTSGSSDLPKAPGGHLHLQARRAGQNSDAGPPRGLTWVPEGAGPVLGGCGRGMDQSCLSADGAGRGCGRATWSVREEQVKQWAAEMLVALEALHEQGVLCRDLHPGNLLLDQAGHIRLTYFGQWSEV-EP--QCCGEAVDNLYSAPEVGGISELTEACDWWSFGSLLYELLTGMALSQSHPSGIQ----------AHTQLQLPEWLSRPAASLLTELLQFEPTRRLGMG-EGGVSKLKSHPFFSTIQWSKLVG |
4DC2 Chain:A ((51-330)) | -----------------------------------------------------------------------------------------------------------------------------------------------------LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-IDWVQTEKHVFEQASNH--PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ-----------------------------------------------------------------------------------------------------------------------------------------------------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS---NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158680 for 1878 contacts (-84.5/contact) +
2D Compatibility (PS) -26234 + (NN) -13965 + (LL) 13944
1D Compatibility (HY) -19200 + (ID) 3900
Total energy: -208035.0 ( -110.77 by residue)
QMean score : 0.421
|
|
|