Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNS---GL-------------FASISVG--VKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARK---PLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEY--FGSASEFQKGEHKNV---EGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD |
| 4MZ1 Chain:C ((9-350)) | -RALTFEDVLLRPGYSEVLPKEVKIHTKLTKNITLNMPLISAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSESGGIKKRKEYPDANKDNFGRLRVGAAIGVGQMDRVDALVEAGV--DVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIATAAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGV--PQISAIDECVEEANKFGVPVIADGGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK------LVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQ----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -130996 for 2615 contacts (-50.1/contact) +
2D Compatibility (PS) -32390 + (NN) -8761 + (LL) 952
1D Compatibility (HY) -20800 + (ID) 5450
Total energy: -197445.0 ( -75.50 by residue)
QMean score : 0.473
|
|
|