Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFG--ITDVIILEK-GTVGHSFKHWPKST-RTITPS------------------FTSNGFGMPDMNAISM------DTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTT-------ETYHADYIFVATGDYNFPKK---P--F-------KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQ-L-----FVTTN-QDIKLTTHDES--TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 2GV8 Chain:A ((4-371)) | PTIRKIAIIGAGPSGLVTAKALLAEKAFD-QVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY--RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG-----------------GDI----QNE-SLQQV--PEITKFDPT--TREIYLKGGKVLSNIDRVIYCTGYLYSVPFP-SLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVP-----FPTSQAQAAFLARVWSGRLKLPSKEEQLK--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GV8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118075 for 2424 contacts (-48.7/contact) +
2D Compatibility (PS) -33761 + (NN) -14019 + (LL) 2500
1D Compatibility (HY) -4000 + (ID) 2900
Total energy: -170255.0 ( -70.24 by residue)
QMean score : 0.399
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