Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALETIATLREYRKS---LKESVGFVPTMGALHRGHQSLIERSLKE-NSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKA-----CEKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTLVLVAARVGKTRLLDNLWV |
| 3COV Chain:A ((12-286)) | LNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL---RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA-----APGVAVDYLELRDIG-LGPMP-LNGSGRLLVAARLGTTRLLDNIAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3COV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131404 for 2150 contacts (-61.1/contact) +
2D Compatibility (PS) -28541 + (NN) -10243 + (LL) 1152
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -193786.0 ( -90.13 by residue)
QMean score : 0.462
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