Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRAKDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTLSKRIAKVKTLGISWGKTIRKFANEFPFIPH-KDLTIIPLIGGMG-SSDIDLHSNQICYDLKKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVSSPYNHSTMEEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTHVIGLSLEELKNIPTVVALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND |
| 2W48 Chain:A ((4-315)) | --SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVAS----SEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLLK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175193 for 2541 contacts (-68.9/contact) +
2D Compatibility (PS) -33197 + (NN) -12273 + (LL) 408
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -243505.0 ( -95.83 by residue)
QMean score : 0.543
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