Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNKEEMNA---RQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHREMKNQLLDSMDLERERGITIKLNAVQLKYKAKDGE-----------TYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADP-----------ERVREEIEDVIGLDASD------------------------------AVLASAKSGIGIEDILEQI------------------------------------------------VEKVPEPSGDVN------------KPLKALIFDSVFDAYRGVIANI------------------------------------------------------------RIMDGVVKAGDRIKMMSNG---------KEFEVTEVGVF-SPKATPRDELLVGDVGYLTAAIKNVGDTRVGDTITLANNPAEEALDGYRKL-NPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQFEAETSQALGFGFRCGFLGLLHMEIIQERIEREF-NIDLITTAPSVIYHVNLTDGSNIVVDNPAEMPEPGVIESVEEPYVKATVMV-------PNDYVGAVMELAQNKRGNFITMEYL-----DDIRVSIVYEIP-----LSEIVYDFFDQLKSSTKG-------YASFDYELIGYK----ASKLVKMDILLNAEKVDALSFI------------------------VHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK |
| 1N0V Chain:C ((2-842)) | VAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGII---------------SAAKGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKKDEIPVLLEKLEIVLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGPADDANCIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLFIKAIQRVVLMMGRFVEPIDDCPAGNIIGLVGI-----DQFLLKTGTLTTSETAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMSES---GEHIVAG-TGELHLEICLQDLEHDHAGVPLKISPPVVAYRETVESESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178260 for 4209 contacts (-42.4/contact) +
2D Compatibility (PS) -61826 + (NN) -1195 + (LL) 1948
1D Compatibility (HY) -20400 + (ID) 5800
Total energy: -265533.0 ( -63.09 by residue)
QMean score : 0.359
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