Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI--
1NDP Chain:A ((6-155))VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPN-PNLYE


General information:
TITO was launched using:
RESULT:

Template: 1NDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65854 for 1140 contacts (-57.8/contact) +
2D Compatibility (PS) -15333 + (NN) -2444 + (LL) -76
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -101207.0 ( -88.78 by residue)
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_1NDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NDP-query.scw
PDB file : Tito_Scwrl_1NDP.pdb: