Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKTKRKMIYETFMLILILLSLALLPYRN-----------------------------------NFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKT--HPFQLIAIIPFYGGF-------------------RAARIVSFVHLLSITA---MGRRYIVPIYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPE-----INNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE |
| 2R9R Chain:B ((178-436)) | ---SGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRIFKLSRHSKGLQILGQTLKAS--MRELGLLIFFLFIGVILFSSAVYFAEADERDSQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166348 for 1275 contacts (-130.5/contact) +
2D Compatibility (PS) -19933 + (NN) -3085 + (LL) 4116
1D Compatibility (HY) -24400 + (ID) 2350
Total energy: -212000.0 ( -166.27 by residue)
QMean score : 0.242
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