Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPVDY-----KEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK
3TLX Chain:A ((30-242))
GRYIFLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQC-KKGFILDGYPRNVKQAEDLNKLLQKNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQREDDNEDVLKKRLTVFKSETSPLISYYKNKNLLINLDATQPANDLEKKISQHIDG--
General information:
TITO was launched using:
RESULT:
Template:
3TLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64933 for 1583 contacts (-41.0/contact) +
2D Compatibility (PS) -22371 + (NN) -9220 + (LL) 424
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -115300.0 ( -72.84 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3TLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TLX-query.scw
PDB file :
Tito_Scwrl_3TLX.pdb
: