Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFKDFNFKPYIQRALDELKFVDPTDVQAKLIPVVRS--GRDLVGESKTGSGKTHTFLLPIFEKLDES----SDDVQVVITAPSRELGTQIYQATKQIAEHSE--QEIRVVNYVGGTDKLRQIEKLKVSQPHIVIGTPGRIYDLVKSG-DLAIHKAHTFVVDEADMTLDMGFLDTVDKIAGSLP-------KDVQILVFSATIPQKLQPFLKKYLTNPVMEKIKTA----TVIADTIDNWLLSTKG-RDKN----AQILELSK-LMQPYLAMIFVNTKERADELHSYLSSN---GLKVAKIHGGIAPRERKRIMNQVKNLEFEYIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSDDSDIRELEKLGINFIPKVIKNGEFQDTYDRDRRNNREKSYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKVDEKRRKERRASNRAKGRAERKAKKQSF |
| 3I5X Chain:A ((78-459)) | ------VLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRRFLDKLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198568 for 2983 contacts (-66.6/contact) +
2D Compatibility (PS) -38962 + (NN) -14320 + (LL) 432
1D Compatibility (HY) -26000 + (ID) 5550
Total energy: -282968.0 ( -94.86 by residue)
QMean score : 0.527
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