Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVL----ARRLPTSVNQPKDYASIDAAPEERERGITINTAHVEYE-TEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDG-PMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEYIPEPERDTDKPLLLPVEDVFSITGRGT----VASGRIDRGTVRVNDEVEIV---------GIKEDIQKAVVTGVEMFRKQLDEGLAGDNVGVLL---RGVQRDEIERGQVLAKPGSINP-HTKFKGEVYILSK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEMVMPGDNVTIEVELIHPIAVEQGTTFSIREG----GRTVGSGIVSEIEA |
| 1KK1 Chain:A ((6-410)) | -------SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEGT--VAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD---------EIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121764 for 3054 contacts (-39.9/contact) +
2D Compatibility (PS) -39741 + (NN) -12568 + (LL) 1996
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -198027.0 ( -64.84 by residue)
QMean score : 0.398
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