Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRKPFIAGNWKMNKNPEEAKAFIEAVASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK |
2J27 Chain:A ((2-249)) | SKPQPIAAANWKCNGSQQSLSELIDLFNSTSI-NHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAI-AKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPE-FVDIIKATQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114654 for 2134 contacts (-53.7/contact) +
2D Compatibility (PS) -27328 + (NN) -15654 + (LL) 76
1D Compatibility (HY) -17600 + (ID) 4600
Total energy: -179760.0 ( -84.24 by residue)
QMean score : 0.578
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