Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGQYDITGKACIMGILNVTPDSFSDGGSYTT-IDSALNQVGEMLE-----QGVAIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAIREVY----PDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAER-NVPIILMHNQEEAV-------YQ----------------------------DIKKEVCEFLLERAERALEAGVSKDNIWIDPGFGFAKTEEQNLELLKGLEQVCD----------------LGYPVLFGISRKRTVNYLLGGNREVTERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV |
| 2BMB Chain:A ((222-541)) | --------VSPTYIMAIFNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKKFIGHITKDV-DAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIKLADAIY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160668 for 2158 contacts (-74.5/contact) +
2D Compatibility (PS) -29026 + (NN) -17632 + (LL) 744
1D Compatibility (HY) -19200 + (ID) 4950
Total energy: -230732.0 ( -106.92 by residue)
QMean score : 0.564
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