Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGK------GTAMAYDQIDGAPEERERGITISTAHVEYE-TETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVEDVFSITGRGT----VATGRVERGQVKVGDEVEII---------GLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALL---RGVSREEIQRGQVLAKPGTITP-HSKFKAEVYVLSK--EEGGRHTPFFSNYRPQFYFRTTDVTGIIHLPEGVEMVMPGDNTEMNVELISTIAIEEGTRFSIREG----GRTVGSGVVSTITE |
| 1KK1 Chain:A ((6-410)) | -------SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEGT--VAENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGK---------DEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151078 for 2972 contacts (-50.8/contact) +
2D Compatibility (PS) -39593 + (NN) -13373 + (LL) 2280
1D Compatibility (HY) -20000 + (ID) 5550
Total energy: -227314.0 ( -76.49 by residue)
QMean score : 0.429
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