Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITMENIVRDGHPALRETAEPVELPPTDAEKQQLADMIEFVKNSQNPELAEKYKLRPGVGLAAPQINIKKRMIAVHAEDASGKLYSYALFNPKIVSHSVEK-SYLTSGEGCLSVDEA-IPGYVPRYARIRVKGTTLEGENIDIRLKGFPAIVFQHEIDHLNGVMFYDHIDKENPFKEPENAIAIER
2OKL Chain:A ((2-185))MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDADGTLYSHALFNPKIISHSVERTYL-QGGEGCLSVD-REVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDDSKPLER


General information:
TITO was launched using:
RESULT:

Template: 2OKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 922 -71319 -77.35 -391.86
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.92

3D Compatibility (PKB) : -77.35
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.92
QMean score : 0.598

(partial model without unconserved sides chains):
PDB file : Tito_2OKL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKL-query.scw
PDB file : Tito_Scwrl_2OKL.pdb: