Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISFIFAMDANRLIGKDNDLPWHLPNDLAYFKKITSGHSIIMGRKTFESI-GRPLPNRKNIVVTSAPDSEFQ-GCTVVSSLKDVLDICSGP-EECFVIGGAQLYTDLFPYADRLYMTKIHHEFEGDRHFPEFDESNWKLVSSEQG---TKDEKNPYDYEFLMYEKKNSSKAGGF
4DFR Chain:A ((1-159))MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIG-RPLPGRKNIILSSQP--GTDDRVTWVKSVDEAIAACGDVP-EIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFS---EFHDADAQNSHSYCFKILERR--------


General information:
TITO was launched using:
RESULT:

Template: 4DFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 697 -28305 -40.61 -185.00
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -40.61
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4DFR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DFR-query.scw
PDB file : Tito_Scwrl_4DFR.pdb: