Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKLDLQPSEKLFIPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSDPLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPVLQLNKEYFFALLRENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAP-TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVPVAVGFGISNREQVIKMNE-ISDGVVVGSALVRKIEELKDRLISAETRNQALQEFEDYAMAFSGLYSLK
1GEQ Chain:A ((1-248))MFK------DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLY-------EIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEK---------GREATEFLKKKVEELLGI----


General information:
TITO was launched using:
RESULT:

Template: 1GEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1308 -128514 -98.25 -537.71
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -98.25
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_1GEQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GEQ-query.scw
PDB file : Tito_Scwrl_1GEQ.pdb: