Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADCDSVTNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
1W74 Chain:A ((12-182))
-----------LATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTGTGRGGPGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS
General information:
TITO was launched using:
RESULT:
Template:
1W74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83539 for 1389 contacts (-60.1/contact) +
2D Compatibility (PS) -18761 + (NN) -15842 + (LL) 224
1D Compatibility (HY) -18400 + (ID) 8550
Total energy: -144868.0 ( -104.30 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1W74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W74-query.scw
PDB file :
Tito_Scwrl_1W74.pdb
: