Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAV---ARRADRITALANQIGGTAIVA--DVTDDAAVEALA----RALSRVDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGELLGKPVRLTEIAPGAVETEFSLVRFDGDQQRADAVYAGMTPLVAADVAEVIGFVATRPSHVNLDQIVIRPRDQASASRRATHPVR
1FMC Chain:B ((12-195))
--------KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF--DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FMC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100099 for 1399 contacts (-71.6/contact) +
2D Compatibility (PS) -19739 + (NN) -10658 + (LL) 5804
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -138992.0 ( -99.35 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1FMC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FMC-query.scw
PDB file :
Tito_Scwrl_1FMC.pdb
: