Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGG-TAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESLERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRIIETEWGSQG--VHSTTLYYPLVATPMIAPTKAYDGLPAL-TAAEAAEWMVTAARTR-PVRIAPRVAVAVNALDSIGPRWVNALMQR--------RNEQLNP |
| 1XSE Chain:A ((22-295)) | -----------------------------NEKFRPEMLQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFH--GEIDNVRKSMEVNFHSFVVLSVAAMPMLMQSQ-GSIAVVSS-VAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVNVSITLCILGLIDTETAIKATSGIYLGPASPKEECALEIIKGTALRQDEMYYVGSRWVPYLLGNPGRKIMEFLSAAEYNWDNVLSNEKLYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XSE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138648 for 2131 contacts (-65.1/contact) +
2D Compatibility (PS) -28364 + (NN) -15297 + (LL) 2380
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -194279.0 ( -91.17 by residue)
QMean score : 0.474
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