Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLRGDDVVGGLGDRARFAQADVTDEAAVSNALE-LADSLGPVRVVVNCAGTGNAIRVLSRDGVF---PLAAFRKIVDINLVGTFNVLRLGAERIAKTEPIGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIEN--PMLNGEVIRLDGAIRMAPR
1UZN Chain:A ((19-245))
--------LVTGGNRGIGLAIAQRLAADGHKVAVTH-RGSGAPKGLFG----VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG-------LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-----FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIP-AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM---
General information:
TITO was launched using:
RESULT:
Template:
1UZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139074 for 1861 contacts (-74.7/contact) +
2D Compatibility (PS) -23839 + (NN) -9720 + (LL) 2132
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -187651.0 ( -100.83 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1UZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZN-query.scw
PDB file :
Tito_Scwrl_1UZN.pdb
: