Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSVMSHEFQLATAETWPNPWPMYRALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRANGG-GDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDPEGIPDAVEELLRLTSPVQGLA--RTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSYVRRPLSVPFRVTS |
3WVS Chain:A ((90-398)) | ----------------------------------------------------------------------------------------MFNMDAPDHTRLRRLISKAFTIRRVEELRPKVHDLAHRLIDDMLAKGEPADLVADYALPIPTTVICELLGVPFEDREKFGRWTDAILSTSTLN-PEEGRVKRM-ELVGYIGGIIAARRAQPADDLISGMIEARDVQDKLTEQEL--LDHCIGLLIAGHETTASQIPSFVYALLDQPQHWKRLLDDPELIPSAVEELFRFVPLGSGSAAPRYAREDIEVGGTLVRAGEPVLVALGAANRDGLRF-EDPEEIKLDRPSNHHIGFGHGIHHCLGAPLARLELQEALRALLERLPTLKVA-GDIAWKSEMMVRGPRSMP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163376 for 2316 contacts (-70.5/contact) +
2D Compatibility (PS) -32955 + (NN) -20269 + (LL) 5408
1D Compatibility (HY) -23200 + (ID) 5600
Total energy: -239992.0 ( -103.62 by residue)
QMean score : 0.429
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