Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFGLRLAEAKAR-RGPLCLGIDPHPELLRGWDLAT------------------------------------------TADGLAAFCDICVRAFADF-AVVKPQVAFFESYGAAGFAVLERTIAELRAADVLVLADAKRGDIGATMSAYATAWVGDSPLAADAVTASPYLGFGSLRPLLEVAAA-HGRGVFVLAATSNPEGAAVQNAAA-DGRSVAQLVVDQVGAANEA--AGPGPGSIGVVVGATAPQA---PDLSAFTGPVLVPGVGVQGGRPEALGGLGGA-ASSQLLPAVAREVLRAGPGVPELRAAGERMRDAVAYLAAV |
| 3N3M Chain:A ((19-335)) | SMGFKVKLEKRRNAINTCLCIGLDPDEKDIENFMKNEKENNYNNIKKNLKEKYINNVSIKKDILLKAPDNIIREEKSEEFFYFFNHFCFYIINETNKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDIGNTVKNYRKFIFEY--LKSDSCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDSAIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNNEFIGFVVGANSYDEMNYIRTYFPNCYILSPGIGAQNGDLHKTLTNGYHKSYEKILINIGRAITKNPYPQK----AAQMYYDQINAI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155362 for 2230 contacts (-69.7/contact) +
2D Compatibility (PS) -28388 + (NN) -7182 + (LL) 836
1D Compatibility (HY) -15200 + (ID) 2900
Total energy: -208196.0 ( -93.36 by residue)
QMean score : 0.473
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