Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM |
3L0G Chain:A ((24-294)) | --------ISFSEIIHNALKEDLGDKGDITTNSILINE-KVNFAINTRENLVVCGIPILEEVFN-MN-KEHVKYEIHKKDGDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKVKIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIV---NGKSVLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNKDIGLDI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136465 for 2176 contacts (-62.7/contact) +
2D Compatibility (PS) -29675 + (NN) -15046 + (LL) 616
1D Compatibility (HY) -17600 + (ID) 4950
Total energy: -203120.0 ( -93.35 by residue)
QMean score : 0.681
|
|
|