Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNSTDGRADGRLRVVVLGSTGSIGTQALQVIADN---PDRFEVVGLAAGGAHLDTLLRQRAQTGVTNIAVADEHAAQRVG----------DIPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRAA---RPGQIVPVDSEHSALAQCLRGGTP-------------DEVAKLVLTASGGPFRGWSAADLEHVTPEQAGAHPTWSMGPMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHA-ADQWAV-E-PATVDDVLDAQRWARERAQRAVSGMASVAIASTAKPGAAGRHASTLERS |
| 4Y67 Chain:A ((11-420)) | -----------PINVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYV-NKSVNELYEQAREFLPEYLCIHDKSVYEELKELVKNIKDYKPIILCGDEGMKEICSSNSIDKIVIGIDSFQGLYSTMYAIMNNKIVALANKESIVSAGFFLKKLLNIHKNAKIIPVDSEHSAIFQCLDNNKVLKTKCLQDNFSKINNINKIFLCSSGGPFQNLTMDELKNVTSENALKHPKWKMGKKITIDSATMMNKGLEVIETHFLFDVDYNDIEVIVHKECIIHSCVEFIDKSVISQMYYPDMQIPILYSLTWPDRIKTNLKPLDLAQVSTLTFHKPSLEHFPCIKLAYQAGIKGNFYPTVLNASNEIANNLFLNNKIKYFDISSIISQVLESFNSQKVSENSEDLMKQILQIHSWAKDKATDIYNKHN----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y67.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218719 for 3252 contacts (-67.3/contact) +
2D Compatibility (PS) -40867 + (NN) -13854 + (LL) 1136
1D Compatibility (HY) -36000 + (ID) 6650
Total energy: -314954.0 ( -96.85 by residue)
QMean score : 0.506
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