Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPE-----HRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRGGHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGHAV----TPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
2D1Y Chain:C ((3-224)) | --------LFAGKGVLVTGGARGIGRAIAQAFAREGALVAL------------CDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV--LEAIALSPDPERTRRDWEDL--HALRRLGKPEEVAEAVL------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151736 for 1791 contacts (-84.7/contact) +
2D Compatibility (PS) -22272 + (NN) 63 + (LL) 5084
1D Compatibility (HY) -10400 + (ID) 4050
Total energy: -183311.0 ( -102.35 by residue)
QMean score : 0.487
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