Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
2KN9 Chain:A ((23-81))
-NDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
General information:
TITO was launched using:
RESULT:
Template:
2KN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9852 for 362 contacts (-27.2/contact) +
2D Compatibility (PS) -6533 + (NN) -6738 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -33865.0 ( -93.55 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2KN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KN9-query.scw
PDB file :
Tito_Scwrl_2KN9.pdb
: