Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECAVVCALHSTGGGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPVRPRRLGDLLPDAFGLDDLPRERR
3R2N Chain:A ((7-125))
--DVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAECSMISALYATGGGRLVAVYCVDGNGDSLMPCGRCRQLLYEHGGPELKIMTPKGVQTMAQLLPQ------------
General information:
TITO was launched using:
RESULT:
Template:
3R2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86252 for 954 contacts (-90.4/contact) +
2D Compatibility (PS) -13010 + (NN) -7962 + (LL) 636
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -122438.0 ( -128.34 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3R2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2N-query.scw
PDB file :
Tito_Scwrl_3R2N.pdb
: