Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSRAPRNLAVSSPSAQVTGRMVQNGENLFQFRREGPQVQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAVKDIEALKTGAIGYEPADITDEEQTLRVVDAATAWHGRLHGVVHCAGGSQTIGPITQIDSQAWRRTVDLNVNGTMYVLKHAARELV-RGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHMMKLAADE--LGPSWVRVNSIRPGLIRTDLVVPVTESPELSADYRVCTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSPMLEPVFGADGLRGVVG |
| 4RF2 Chain:B ((25-269)) | ------------------------------------------LKGKVAIVTGGTLGIGLAIADKFVEEGAKVVITGRHADVGEKAAKSIGG--TDVIRFVQHDASDEAGWTKLFDTTEEAFGPVTTVVNNAGIAVS-KSVEDTTTEEWRKLLSVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPTLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLEGAEEMMSQ-RTKTPMGHIGEPNDIAWICVYLASDESKFATGAEFVVDGGY-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161707 for 2126 contacts (-76.1/contact) +
2D Compatibility (PS) -26132 + (NN) -11129 + (LL) 3780
1D Compatibility (HY) -12000 + (ID) 3900
Total energy: -211088.0 ( -99.29 by residue)
QMean score : 0.555
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